Jmol and Flamory

Flamory provides the following integration abilities:

Create and use window snapshots for Jmol
Take and edit Jmol screenshots
Automatically copy selected text from Jmol and save it to Flamory history

To automate your day-to-day Jmol tasks, use the Nekton automation platform. Describe your workflow in plain language, and get it automated using AI.

Screenshot editing

Flamory helps you capture and store screenshots from Jmol by pressing a single hotkey. It will be saved to a history, so you can continue doing your tasks without interruptions. Later, you can edit the screenshot: crop, resize, add labels and highlights. After that, you can paste the screenshot into any other document or e-mail message.

Here is how Jmol snapshot can look like. Get Flamory and try this on your computer.

Jmol - Flamory bookmarks and screenshots

Application info

Jmol is a free, open source molecule viewer for students, educators, and researchers in chemistry and biochemistry. It is cross-platform, running on Windows, Mac OS X, and Linux/Unix systems.

The JmolApplet is a web browser applet that can be integrated into web pages.

The Jmol application is a standalone Java application that runs on the desktop.

The JmolViewer is a development tool kit that can be integrated into other Java applications.

Integration level may vary depending on the application version and other factors. Make sure that user are using recent version of Jmol. Please contact us if you have different integration experience.